Publications List

Thesis/Dissertation

Luís M. O. Matos, "Lossless compression algorithms for microarray images and whole genome alignments", Ph.D. Thesis, University of Aveiro, Aveiro, Portugal, February 2015 (Supervisors: Professor António J. R. Neves and Professor Armando J. Pinho | Slides | BIB).

Luís M. O. Matos, "Study and application of the H.264 video coding standard", Master Dissertation, University of Aveiro, Aveiro, Portugal, July 2009 (Supervisors: Professor António J. R. Neves and Professor Armando J. Pinho | Grade 17.0 out of 20.0 | Slides | BIB).


Book chapter

Luís M. O. Matos, António J. R. Neves, and Armando J. Pinho, "Lossy-to-lossless compression of biomedical images based on image decomposition", in Applications of Digital Signal Processing through Practical Approach, Sudhakar Radhakrishnan (Editor), InTech, pp. 125-158, October 2015 (DOI | URL | PDF | BIB).


Journal articles

Luís M. O. Matos, António J. R. Neves, Diogo Pratas, and Armando J. Pinho, "MAFCO: a compression tool for MAF files", in PLoS ONE, volume 10, number 3, page e0116082, March 2015 (IF 2013: 3.534 | DOI | SI | BIB).

Luís M. O. Matos, Diogo Pratas, and Armando J. Pinho, "A Compression Model for DNA Multiple Sequence Alignment Blocks", in IEEE Transactions on Information Theory, volume 59, number 5, pages 3189-3198, May 2013 (IF 2013: 2.650 | DOI | BIB).

Luís M. O. Matos, José Moreira, and Alexandre Carvalho, "A Spatiotemporal extension for dealing with moving objects with extent in Oracle 11g", in ACM SIGAPP Applied Computing Review, ACR 2012, volume 12, number 2, pages 7-17, June 2012 (URL | BIB).


Conference papers

Luís M. O. Matos, António J. R. Neves, and Armando J. Pinho, "A rate-distortion study on microarray image compression", in Proceedings of the 20th Portuguese Conference on Pattern Recognition, RecPad 2014, Covilhã, Portugal, October 31, 2014 (DOI | Poster | BIB).

Luís M. O. Matos, António J. R. Neves, and Armando J. Pinho, "Compression of microarrays images using a binary tree decomposition", in Proceedings of the 22nd European Signal Processing Conference, EUSIPCO 2014, pages 531-535, Lisbon, Portugal, September 1-5, 2014 (DOI | URL | URL | Slides BIB).

Luís M. O. Matos, António J. R. Neves, Diogo Pratas, and Armando J. Pinho, "Lossless compression of symbolic and biomedical images using finite-context models", in Proceedings of University of Aveiro Research Day 2013, Aveiro, Portugal, June 19, 2013 (BIB).

Luís M. O. Matos, António J. R. Neves, and Armando J. Pinho, "Compression of DNA microarrays using a mixture of finite-context models", in Proceedings of the 18th Portuguese Conference on Pattern Recognition, RecPad 2012, Coimbra, Portugal, October 26, 2012 (DOI | Poster BIB).

Luís M. O. Matos, Diogo Pratas, and Armando J. Pinho, "Compression of whole genome alignments using a mixture of finite-context models", in Proceedings of the International Conference on Image Analysis and Recognition, ICIAR 2012, Eds. A. Campilho and M. Kamel, volume 2324 of Lecture Notes in Computer Science (LNCS), pages 359-366, Springer Berlin Heidelberg, Aveiro, Portugal, June 25-27, 2012 (DOI | Slides | BIB).

Luís M. O. Matos, José Moreira, and Alexandre Carvalho, "Representation and management of Spatiotemporal data in Object-Relational Databases", in Proceeding of the 2012 ACM Symposium on Applied Computing, SAC 2012, volume 1, pages 13-20, Riva del Garda (Trento), Italy, March 28-30, 2012 (DOI | Slides | BIB).

Luís M. O. Matos, António J. R. Neves, and Armando J. Pinho, "Lossy-to-lossless compression of microarrays images using expectation pixel values", in Proceedings of the 17th Portuguese Conference on Pattern Recognition, RecPad 2011, Porto, Portugal, October 28, 2011 (URL, Poster | BIB).

Diogo Pratas, Carlos A. C. Bastos, Armando J. Pinho, António J. R. Neves, and Luís M. O. Matos, "DNA Synthetic Sequences Generation Using Multiple Competing Markov Models", in Proceedings of the IEEE Workshop on Statistical Signal Processing, SSP 2011, pages 133-136, Nice, France, June 28-30, 2011 (DOI | Poster | BIB).

Luís M. O. Matos, António J. R. Neves, and Armando J. Pinho, "Lossless compression of microarrays images based on background/foreground separation", in Proceedings of the 16th Portuguese Conference on Pattern Recognition, RecPad 2010, Vila Real, Portugal, October 29, 2010 (URL | Poster | BIB).

Luís M. O. Matos, António J. R. Neves, and Armando J. Pinho, "The new video coding standard H.264/Advanced Video Coding", in Proceedings of the 15th Portuguese Conference on Pattern Recognition, RecPad 2009, Aveiro, Portugal, October 23, 2009 (URL | Poster | BIB).


Publications Details


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Last Update 2015/31/10 - Luís M. O. Matos